FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005345465

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005345465
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2558955
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGTACG150.002221991370.025611
TCTGTCG6150.024.4704518
TAATACT5050.020.7984644
CTGTCGC7250.020.7576929
GTATAAT4900.020.7218651
TGTCGCC7450.020.2004410
TATCTCG7650.019.67232570
GTCTTGC14250.019.4106081
GTGTATA6750.019.1922041
GTCTCGC7650.018.7650341
GTATAGA3850.018.188471
TCGCTCT7600.017.9660434
GTATATA6350.017.6442471
CGAATTA1000.00969492717.4995627
TACTCCG1854.7404756E-617.0322575
ATCTCGT6400.016.95236870
GTATTAC4550.016.9292681
AACGCGG1250.001763687416.79957850
GTATAGC3601.8189894E-1216.5338251
GTCTTAC7550.016.2311021
Produced by FastQC (version 0.11.5)