Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005345511 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1488755 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 59 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTAGTGT | 60 | 5.1227224E-4 | 47.990173 | 7 |
TTAACTA | 45 | 0.009915247 | 47.990166 | 5 |
GTCTAGT | 75 | 0.001536483 | 38.392136 | 5 |
TAACTAC | 75 | 0.001536483 | 38.392136 | 6 |
TATAAGA | 265 | 0.0 | 38.02995 | 2 |
GTATAAG | 270 | 0.0 | 37.325687 | 1 |
GTCCTAT | 240 | 4.7293724E-11 | 32.993244 | 1 |
GTATAAA | 110 | 2.540794E-4 | 32.72057 | 1 |
GTGTATA | 135 | 2.249877E-5 | 31.993448 | 9 |
GTCCTAG | 95 | 0.004895696 | 30.309584 | 1 |
TCTAGTG | 95 | 0.004895696 | 30.309584 | 6 |
TAAGAGA | 310 | 1.8189894E-12 | 30.187366 | 4 |
CTTCTAG | 105 | 0.007982392 | 27.422955 | 1 |
TAGTCTG | 160 | 7.169783E-5 | 26.99447 | 1 |
ATAAGAG | 350 | 5.456968E-12 | 26.737381 | 3 |
GTACAGA | 200 | 1.1264796E-5 | 25.194841 | 1 |
ATTAAGG | 145 | 0.0012787438 | 24.822504 | 3 |
GAGTTAC | 145 | 0.0012787438 | 24.822504 | 7 |
TCAGAGT | 150 | 0.0015579289 | 23.995085 | 4 |
AGAGTTA | 155 | 0.0018854504 | 23.22105 | 6 |