FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005345998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005345998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99414456
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN19761271.9877662459874046No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG2989930.300754047278597No Hit
TTTGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1640680.1650343487269095No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1044210.10503603218429321No Hit
GGTGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1041850.1047986421612567No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)