FastQCFastQC Report
Sat 25 May 2024
EGAF00005346166

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346166
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98420300
Total Bases13.3 Gbp
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG2131650.21658641560734931No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1417910.14406682361260836No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC1040860.1057566376042341No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)