FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005346275

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346275
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102078298
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1557020.15253193190975814No Hit
GGGGCCGCAAGTGCGTTCGAAGTGTCGATGATCAATGTGTCCTGCAATTC1438990.14096923912269776No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1178450.11544569444133952No Hit
CGTTTGAATATTTGCTACTACCACCAAGATCTGCACCTGCGGCGGCTCCA1064280.10426114275533865No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)