FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005346290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87724609
Sequences flagged as poor quality0
Sequence length35-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN20245402.307835877615596No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG2761720.3148170201590753No Hit
TTTGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1034600.11793725977165655No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)