FastQCFastQC Report
Tue 31 May 2022
EGAF00005346334

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346334
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences123035312
Sequences flagged as poor quality0
Sequence length35-151
%GC59

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN6182920.5025321510949637No Hit
TTTGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1796930.1460499405243919No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1584160.12875653129566575No Hit
TTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1522410.12373764696106107No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)