FastQCFastQC Report
Tue 14 May 2024
EGAF00005346340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93728791
Total Bases10.4 Gbp
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN17528821.8701638859291376No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG2047740.21847502545935968No Hit
TTTGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1359530.14504934775057537No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)