FastQCFastQC Report
Sat 25 May 2024
EGAF00005346455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92394661
Total Bases12.3 Gbp
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1504030.1627832153634938No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1227010.13280096346692585No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)