FastQCFastQC Report
Fri 27 May 2022
EGAF00005346540

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346540
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105345389
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCT1706150.16195772935064107No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1353280.12846124665219094No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGA1155170.10965548762651585No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)