FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005346599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346599
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90230532
Sequences flagged as poor quality0
Sequence length35-151
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN8042390.8913158131440476No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1118190.12392590126809847No Hit
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG959360.10632321219163376No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)