FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005346668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101288653
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN16728181.6515354390190182No Hit
TTTGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG3179980.3139522449765424No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1849860.18263250079947257No Hit
TTAGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1511400.14921710924519846No Hit
TGTGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1268190.1252055351155672No Hit
GGTGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1154010.11393280153503473No Hit
GTTGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1127120.11127801255289672No Hit
TTGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1026960.1013894419150781No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)