FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005346669

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346669
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94414404
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2692730.28520330436021185No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1883690.19951298956460076No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG1083140.11472190196741591No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)