FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005346867

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346867
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1524399
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACCG1201.0040234E-535.9956635
TCTGTCG4900.035.261068
GTATAGA4500.032.4560431
GTCTTGC13950.031.4090751
TCGCTCT7050.027.5711464
GTCTCGC6500.026.9634841
GTATTAA4400.026.5549471
CTCGCTC7900.026.4271973
GTCTTAC6650.026.3552841
CTGTCGC7650.026.3497669
TCTCGCT7500.025.939852
TAATACT5400.025.3302824
GTGTAAC5250.025.0375211
GTACAGA9000.024.3420331
ACTGTCG1902.3010242E-422.7341028
TAACACG3554.478352E-922.3071734
CTGTCGA1650.002710013421.8155549
CTTGCTC18900.021.711673
GTATAGG5251.8189894E-1220.8646011
CGCTCTG8650.020.8067425
Produced by FastQC (version 0.11.5)