FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005346895

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005346895
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2616308
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTGTCG9650.040.284918
GTCTCGC11050.033.4225351
GTCTTGC23650.031.538251
TCGCTCT12900.027.351554
TCTCGCT13450.026.2330842
CTGTCGC14450.025.9066589
CGCTCTG12600.024.5738665
GTACCGG2101.570432E-524.1384961
CTCGCTC14100.023.4916923
GTATTAA8350.023.4157891
GTATTAG7800.023.2100941
TAGTACT5750.022.5413654
GTGTTAG16650.022.1813221
GTCTTAC9150.022.1599311
GTTTCAC38300.021.996963
CCATGTT40400.021.9179389
GTATAAC4307.2759576E-1121.8930551
GTCTCAC28600.021.7752881
GTATTAC6000.021.724651
GGGTTTC42000.021.7246481
Produced by FastQC (version 0.11.5)