Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005346926 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1842504 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGTAAA | 140 | 6.695009E-7 | 36.1934 | 1 |
GTCTCGC | 800 | 0.0 | 34.38373 | 1 |
TCTGTCG | 730 | 0.0 | 29.582504 | 8 |
GTCTTGC | 1670 | 0.0 | 29.04141 | 1 |
GTCTAAC | 410 | 0.0 | 28.248508 | 1 |
GTCTTAC | 745 | 0.0 | 28.177412 | 1 |
TCGCTCT | 920 | 0.0 | 27.385998 | 4 |
GTGTAAA | 1185 | 0.0 | 26.26694 | 1 |
GTATAAC | 305 | 7.2577677E-10 | 26.106716 | 1 |
GTATAGG | 455 | 0.0 | 25.454699 | 1 |
TGCTACG | 200 | 1.1256245E-5 | 25.197853 | 2 |
GTCTCAC | 2160 | 0.0 | 25.134306 | 1 |
TCTCGCT | 1060 | 0.0 | 25.129934 | 2 |
CTCGCTC | 1085 | 0.0 | 24.54957 | 3 |
GTTTCAC | 2835 | 0.0 | 24.377552 | 3 |
GGGTTTC | 3130 | 0.0 | 23.58931 | 1 |
GTATTAG | 665 | 0.0 | 22.858992 | 1 |
CGCTCTG | 970 | 0.0 | 22.263727 | 5 |
GTATTAT | 655 | 0.0 | 22.10284 | 1 |
GGTTTCA | 3020 | 0.0 | 21.931906 | 2 |