FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005347130

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005347130
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2915271
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACGCG700.001083459741.2206761
TCTGTCG12200.034.2289628
GTCTCGC14000.034.0070571
GTCTTGC28100.031.0621991
GCGTTAG2252.9624061E-828.8544711
GGTATAC6750.027.7857881
TCGCTCT15350.027.6738244
CTGTCGC16300.026.945289
GTATAAT8700.026.5328481
GTACTAC6850.026.3270741
GGGTTTC51750.025.9272081
GTCTTAC11200.025.7629221
CTCGCTC16900.025.5617223
GTATTAG9900.025.5026911
GTATTAC7950.025.4064541
GTTTCAC46750.025.257353
TCTCGCT18000.024.8004532
CGCTCTG16900.024.2836365
GTGTTAG20800.024.2765981
ACCATGT38150.022.4583578
Produced by FastQC (version 0.11.5)