FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005347137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005347137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2668882
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTTGC23900.033.4332051
GTCTCGC11200.030.4833771
GTACGTA1204.013812E-430.2671831
GTACTAC4650.029.6813661
GTATTAC7050.027.8200471
TCGCTCT13800.027.3228234
TCTGTCG10150.025.7136978
TCTCGCT13700.024.3498082
GGATACG2401.5728783E-624.2137471
ACACCGT5100.024.1661156
CGCTCTG15150.023.9263975
TAGTACT6150.023.5806734
CTCGCTC15500.023.3905093
TCGCGTA1550.001809714423.386124145
GTAACCG1600.002174252422.6595523
GTGTAAA15750.022.1382831
GTACTAT6250.022.0829371
GTATAAT7900.022.0682261
TTGCTCT37350.021.9376014
GTCTCAC30200.021.8885841
Produced by FastQC (version 0.11.5)