FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005347502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005347502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2132737
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGAAT500.007212792527.99915712
TCTGTCG6000.026.2492088
GTCTCGC5800.023.538741
CTGTCGC7950.020.69129
TGTCGCC8300.020.66202710
GACCGTA850.00379247420.5876167
GTACCGT1205.7209243E-520.416536
TGTACCG1055.468049E-420.0003365
GTCGCCC7200.019.92995611
GTCTTGC13200.019.3595621
TTATACT2900.019.3106694
GTGTTAT3850.019.0943621
GTATTAA3850.018.1851061
TATACTG3850.018.1821235
GTGTTAG8900.017.6998311
GTGTACG1200.001339952617.5031661
GTATAGG2601.4588295E-917.5031661
ACTATCG1000.00969469217.4994747
GTATAAT3700.017.0301071
GTGTTAC5150.016.9933641
Produced by FastQC (version 0.11.5)