FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005347659

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005347659
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24361670
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA29500.07.24522845
AGATCGG37900.07.18284745
TAGATCG14050.06.565351544
ATCGGAA27800.06.39341345
CGGAAGA26500.05.858058545
TCGGAAG28300.05.803458744
Produced by FastQC (version 0.11.5)