FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005347660

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005347660
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24361670
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA29700.07.27215545
AGATCGG38400.06.913518445
TAGATCG12800.06.151859845
ATCGGAA28300.06.041927345
TCGGAAG28500.05.762704444
CGGAAGA30600.05.146653745
Produced by FastQC (version 0.11.5)