FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005347911

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005347911
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2133409
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTGTCG8600.040.179878
GTCTCGC10000.032.020341
ATCCGCG900.00375705631.9950837
CTGTCGC11750.030.633599
GTACTAC4100.030.174381
GTCTTGC18750.029.885651
TCGCTCT10350.027.1415334
GTATCGG1357.9098024E-426.953151
GTCTTAC8550.026.3857151
GGTATAC4200.025.9905361
TCTCGCT12300.025.838132
CTCGCTC11550.025.6398453
GTATTAC5450.025.3705791
GTCCGAA1751.2246576E-424.9509161
GTCCGGA2101.511413E-524.2578331
GTGTAAA12650.024.1619531
GTCTCAC22350.023.1182021
GTGTTAG15200.022.9811061
GTACTAT5200.022.3918461
GTACATA6250.022.1231441
Produced by FastQC (version 0.11.5)