FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005347988

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005347988
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2188203
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACGAC450.004307260331.1141283
ATATACG500.007208360428.0027163
TCTGTCG5750.025.5647778
TCGCTCT5900.023.1373084
TGTCGCC6550.022.976710
GTCTCGC6150.022.1982861
TATACGT952.7811248E-422.1069034
CGAACTA1003.9356586E-420.99963670
GTCGCCC6350.020.94451911
CTCGCTC6150.020.489793
CTGTCGC7250.019.7927639
GTATAAT3400.019.5616151
GTCTTGC13250.019.549961
GGGTACG900.00527400719.447221
TCGCCCA7700.019.0905812
GTCTCAC15350.018.2436431
GCCGACC3101.8189894E-1218.06420570
GTATAGG3500.018.0025671
GTATCAC4100.017.9293881
TCTCGCT6650.017.8964732
Produced by FastQC (version 0.11.5)