FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005348000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005348000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2079207
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATACGAC1102.3646862E-1135.0015033
TCTGTCG5800.028.3619238
GCATACG2050.025.6108571
TACGACA1401.1919838E-825.0004734
CGACATT1401.19234755E-824.9998726
ACGGCGT700.001226925324.99987233
TGTCGCC6950.022.1581610
CTGTCGC7550.021.7879689
ACGATAA1454.612557E-721.72402870
GTATAAG4150.021.0852431
GTATAAT3400.020.5891191
GTATTAC3300.020.1523821
GTATTAA3650.020.1378521
ACGACAT1751.2664896E-720.0003785
GTCTCGC6500.019.9239331
GTCGCCC6900.019.78250711
GTATTAT3900.019.7444361
CATACGA2203.5051926E-919.0917282
TCGCCCA7200.018.95823512
TCGCTCT6900.018.768474
Produced by FastQC (version 0.11.5)