FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005348115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005348115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2213960
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGTCGC5550.020.8105499
GTCTCGC6050.020.2504231
TGTCGCC6000.019.83308410
TCTGTCG5400.018.796068
GTCCTAT4200.017.5021511
GTCGCCC5900.017.20317311
GATAACG1250.001762372416.8013082
GTATTAC3601.8189894E-1216.529811
GTATTAT4300.016.281071
GTACAAT4950.016.2646241
GTCTTGC12250.016.0019661
CCGACAA1755.6252386E-515.9997989
TATCCCG1554.0555603E-415.8073235
CACGAGC5550.015.76592370
GTGTAGT7800.015.7070591
GTATAGA3602.7284841E-1115.5574671
GTGTTAG9250.015.515421
GTATAGC3653.45608E-1115.3443511
GAATAAT6700.015.1511161
ATCTCGT7200.015.06959570
Produced by FastQC (version 0.11.5)