FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005348132

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005348132
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2277301
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTCGC5800.025.948731
TCTGTCG5250.024.6665578
GTGCGAC1052.0414896E-523.3337461
GATACGA750.001833627223.33323137
GTATTAT3850.022.727671
CTGTCGC6250.022.3999029
GTCGCCC5500.022.2726311
GTCTTGC12650.022.1347771
TACACCG800.002667670821.8753855
TGTCGCC6400.021.87490510
TCTCGCT7100.021.1975562
TCGCTCT6500.021.000374
GTCTAAG4800.020.4170251
GTATAAC2750.020.3639951
GTATAGA4350.020.1152951
CGCTCTG6500.019.9234285
CTCGCTC7150.018.6017253
GTATTAG5550.018.2886091
GTACTAT3300.018.0306191
TCGCCCA7750.017.61282512
Produced by FastQC (version 0.11.5)