Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005348340 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2090364 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCTGTCG | 930 | 0.0 | 35.610973 | 8 |
GTCTCGC | 820 | 0.0 | 35.12004 | 1 |
TCGCTCT | 830 | 0.0 | 34.69691 | 4 |
GTCTTGC | 1585 | 0.0 | 34.06755 | 1 |
CTAATCG | 115 | 3.294406E-4 | 31.304146 | 9 |
CGCTCTG | 930 | 0.0 | 29.417759 | 5 |
CTCGCTC | 870 | 0.0 | 28.963945 | 3 |
GTCTCAC | 2065 | 0.0 | 28.589247 | 1 |
GTCTTAC | 625 | 0.0 | 27.6465 | 1 |
TCTCGCT | 1035 | 0.0 | 26.433348 | 2 |
GTATTAA | 605 | 0.0 | 26.180395 | 1 |
CTGTCGC | 1365 | 0.0 | 24.791048 | 9 |
GGTTAGC | 425 | 1.8189894E-12 | 23.716358 | 1 |
GGTCCGA | 185 | 1.9202483E-4 | 23.350084 | 1 |
GTGTAAT | 640 | 0.0 | 22.498777 | 1 |
TTGCTCT | 2340 | 0.0 | 22.460318 | 4 |
GAGTGCA | 4645 | 0.0 | 21.699575 | 6 |
CTTGCTC | 2135 | 0.0 | 21.581966 | 3 |
GTCTTGG | 1470 | 0.0 | 21.549849 | 1 |
TATTAGC | 435 | 9.276846E-11 | 21.516073 | 2 |