FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005348369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005348369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6515518
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATTAG13400.026.3581681
GTGTTAG39700.024.1482161
GTCTCGC36250.022.469551
GTATAAG13400.022.0547941
GTATAAT12100.022.0414561
GTGTAAC14150.021.9046331
GTGTAAA22450.021.8331571
TCTGTCG29600.021.6472138
GTATAGG14450.020.951031
GTATATA11400.020.8657021
TGTTAGC40100.020.474072
GTCTTAC24850.019.7245221
GTTAGCC38400.019.6917863
GTGTTAC20900.018.9688191
TCGCTCT41200.017.9996384
GGCTAGA30450.017.990791
GTCTTGC65050.017.8403151
GTGTTAT17150.017.6526181
GTATTAA11100.017.5333441
TATACCG4557.7530785E-817.405445
Produced by FastQC (version 0.11.5)