FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005348509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005348509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2602729
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTGTCG10200.050.8180278
GTCTTGC23400.035.2132951
GTCTCGC10800.034.4342421
TCGCTCT12650.033.5773934
GTATAAT6750.033.4889871
CTGTCGC15800.033.2622229
TCTCGCT13300.029.2529622
TTGCTCT32450.027.9538334
GTATTAG8000.027.344841
CTCGCTC14000.027.2756793
GTGTTAG18750.026.4454981
GTCTTAC9100.026.4433611
CTTGCTC31700.026.1376343
TAATACT7250.025.8178944
CGCTCTG14800.025.7809945
GGGTTTC42850.025.6962781
GTTTCAC37000.025.1197723
GTCTCAC27650.024.5262931
TCTATCG1500.001557365223.9974048
GTGTTAC10150.023.707841
Produced by FastQC (version 0.11.5)