Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005349119 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2096490 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCTCGC | 915 | 0.0 | 49.11671 | 1 |
TCTGTCG | 875 | 0.0 | 46.900097 | 8 |
CTGTCGC | 1055 | 0.0 | 43.675156 | 9 |
TCTCGCT | 1030 | 0.0 | 40.56453 | 2 |
TCGCTCT | 920 | 0.0 | 39.92498 | 4 |
CTCGCTC | 1085 | 0.0 | 35.181026 | 3 |
GTATAAT | 675 | 0.0 | 33.290215 | 1 |
CGCTCTG | 1040 | 0.0 | 33.228813 | 5 |
GTCTTGC | 1835 | 0.0 | 33.181946 | 1 |
TTCACCG | 530 | 0.0 | 29.885036 | 5 |
GTATAAG | 610 | 0.0 | 29.707685 | 1 |
TTACTCT | 1105 | 0.0 | 27.3747 | 4 |
GTATTAT | 640 | 0.0 | 27.182533 | 1 |
CTCGATC | 795 | 0.0 | 27.168213 | 8 |
TAGTACT | 485 | 0.0 | 26.729641 | 4 |
TCGATCT | 825 | 0.0 | 26.180279 | 9 |
GTACGTA | 140 | 0.0010008896 | 25.888128 | 1 |
ATAGTAC | 460 | 0.0 | 25.050968 | 3 |
TCTCGAT | 805 | 0.0 | 25.042004 | 7 |
GTATAGG | 590 | 0.0 | 24.571783 | 1 |