FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005349757

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005349757
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4024009
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTCGC11950.022.8558461
TCTGTCG11250.020.5332138
CTGTCGC12050.020.3318319
GTGTACG2900.019.3193551
GTATTAT8450.019.0621431
GTGTTAG19850.019.0517041
GTATTAC5500.018.4631561
TGTCGCC12550.018.12738410
GTCTTGC25950.018.0816481
GTATTAG7750.018.0729431
TCGCTCT13600.018.0168384
GTCGCCC11800.017.49989711
GTATAGA6700.017.246851
GTATATA8200.017.0811371
CTCGCTC14600.017.0225643
GTATAGG6800.016.9932171
GTACTAC4400.016.712341
TCTCGCT15450.016.540822
TGCGTAC1704.3904867E-516.47049110
GTATAAG7050.016.3906211
Produced by FastQC (version 0.11.5)