Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005349788 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3904695 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCTTGC | 3535 | 0.0 | 33.24858 | 1 |
GTCTCGC | 1630 | 0.0 | 32.447964 | 1 |
TCGCTCT | 1790 | 0.0 | 29.760529 | 4 |
TCTGTCG | 1570 | 0.0 | 27.512861 | 8 |
CTCGCTC | 1970 | 0.0 | 24.848753 | 3 |
GTGTTAC | 1555 | 0.0 | 24.564928 | 1 |
TCTCGCT | 2130 | 0.0 | 24.334385 | 2 |
GTGTAGT | 1915 | 0.0 | 24.166533 | 1 |
GTGTAAT | 1360 | 0.0 | 23.766012 | 1 |
TCCGTAC | 335 | 2.2955646E-9 | 23.63795 | 3 |
CTGTCGC | 1795 | 0.0 | 23.262033 | 9 |
GTCTCAC | 4405 | 0.0 | 23.179893 | 1 |
GTGTTAT | 1460 | 0.0 | 23.144485 | 1 |
GTGTTAG | 2480 | 0.0 | 23.10391 | 1 |
TTGCTCT | 5270 | 0.0 | 22.948833 | 4 |
GTCTTAC | 1675 | 0.0 | 22.805054 | 1 |
GTATTAG | 1205 | 0.0 | 22.555748 | 1 |
GTATAAT | 1000 | 0.0 | 22.037575 | 1 |
GTATTAA | 1170 | 0.0 | 21.974789 | 1 |
TAATACT | 1290 | 0.0 | 21.763906 | 4 |