Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005349889 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2197275 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCTGTCG | 970 | 0.0 | 37.11278 | 8 |
GTCTCGC | 1130 | 0.0 | 34.41982 | 1 |
TCGCTCT | 1115 | 0.0 | 33.577915 | 4 |
TACACCG | 175 | 1.07358574E-7 | 32.913734 | 5 |
GTATTAG | 745 | 0.0 | 31.904425 | 1 |
TCTCGCT | 1305 | 0.0 | 30.907991 | 2 |
CTGTCGC | 1290 | 0.0 | 30.139032 | 9 |
GTGTTAC | 945 | 0.0 | 28.9631 | 1 |
GTCTTGC | 2050 | 0.0 | 28.810665 | 1 |
CTCGCTC | 1350 | 0.0 | 28.810663 | 3 |
CGCTCTG | 1370 | 0.0 | 27.853548 | 5 |
GTATTAC | 495 | 0.0 | 27.646593 | 1 |
GTGTTAG | 1620 | 0.0 | 27.565758 | 1 |
GTCTTAC | 945 | 0.0 | 26.67654 | 1 |
GTACCGT | 135 | 8.4201404E-4 | 26.66622 | 6 |
GTATAAG | 595 | 0.0 | 26.631704 | 1 |
GTATAGG | 595 | 0.0 | 24.21064 | 1 |
GTGTATA | 1265 | 0.0 | 23.913988 | 1 |
TGTTAGC | 1420 | 0.0 | 23.83981 | 2 |
GTGTAAC | 720 | 0.0 | 23.008516 | 1 |