FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005350012

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005350012
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2740713
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACCG1102.538958E-432.725825
GTCTCGC12600.032.5979271
GTCTTGC20900.031.374791
TACACCG1851.7490311E-731.133755
TCGCTCT12450.029.4926644
TCTGTCG11600.028.5504558
CTCGCTC12700.028.3451963
GTATTAG8400.028.3087311
GGGTAAC9650.027.6286811
CGCTCTG14000.027.2559325
GTGTTAG17850.027.04721
GGTATAC5700.026.54791
GTACCGG2456.897244E-826.4478036
TCTCGCT14800.026.269582
TAATACT8400.025.7131444
TGTACCG2259.688138E-725.5988625
CGTTTCG1701.08194516E-425.4106359
GTACTAT5300.024.4727291
GTACAAT8000.024.319771
ATACCGT1500.001556808523.9989346
Produced by FastQC (version 0.11.5)