FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005394645

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005394645
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15345131
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCAGA1318550.019.72452
CGCAGAG1319950.019.709643
GCAGAGC1321750.019.6823524
GCTCAAC1338000.019.5480489
AGCTCAA1337500.019.5404058
TGCGCAG1346500.019.5360011
GCAGGAG399250.019.4408176
AGAGCTC1337750.019.4155486
CAGAGCT1339350.019.4140055
GAGCTCA1339900.019.4049747
AGGAGAG302950.019.37225
TTGTAGG324950.019.3536431
CTCAACT1348200.019.34082210
TGCAGGA404550.019.1885935
TAGGAGA304050.019.1606964
TCAACTA357800.019.14352411
AAGTGCA408700.019.126312
TGTAGGA310800.019.0442122
GGAGTTT412050.019.0255769
TAAGTGC428550.019.0188961
Produced by FastQC (version 0.11.5)