FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005394654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005394654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14484366
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCAGA1271550.019.705872
CGCAGAG1272500.019.6922553
GCAGAGC1275700.019.6636524
TGCGCAG1297450.019.5452731
GCTCAAC1290700.019.5030369
GCAGGAG375200.019.479446
AGCTCAA1291200.019.4785168
CAGAGCT1288700.019.4412365
TTGTAGG302000.019.426671
AGAGCTC1289050.019.4057066
GAGCTCA1291350.019.3912097
AGGAGAG280900.019.3156535
CTCAACT1300750.019.30468810
TAGGAGA281300.019.1922074
TGCAGGA381950.019.1404275
GGAGTTT387350.019.1211559
AAGTGCA385100.019.09712
TCAACTA347400.019.07491111
TGTAGGA288150.019.0568072
GAGTTTA388350.019.04617110
Produced by FastQC (version 0.11.5)