FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005394657

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005394657
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15017751
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCAGA1311050.019.7344072
CGCAGAG1312450.019.7133543
GCAGAGC1316800.019.675614
TGCGCAG1338450.019.5703241
GCTCAAC1330200.019.5417949
AGCTCAA1332000.019.499628
GCAGGAG394900.019.4648196
CAGAGCT1330750.019.4235175
AGAGCTC1329600.019.4222686
GAGCTCA1331850.019.4149197
TTGTAGG313100.019.34791
CTCAACT1342600.019.33822310
AGGAGAG292200.019.2496555
AAGTGCA404100.019.190642
TAGGAGA291750.019.1491034
TGCAGGA402800.019.1227825
TCAACTA359400.019.11130311
GGAGTTT408100.019.0800049
TAAGTGC424550.019.0659331
TGTAGGA298600.019.0186022
Produced by FastQC (version 0.11.5)