FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005394660

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005394660
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11620794
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCAGA975150.019.7285982
CGCAGAG976050.019.7114353
GCAGAGC978750.019.6741814
GCTCAAC987700.019.5439139
TGCGCAG998700.019.5180931
AGCTCAA989200.019.5021468
AGAGCTC987650.019.4250096
CAGAGCT989650.019.4160615
GAGCTCA989500.019.40897
GCAGGAG299100.019.3872646
TTGTAGG236750.019.3298531
CTCAACT998150.019.30123310
TCAACTA267950.019.214811
AGGAGAG221000.019.2117775
AAGTGCA303700.019.194622
TGCAGGA302450.019.1526895
TAGGAGA221250.019.0861194
GGAGTTT308450.019.0551139
TGTAGGA225650.019.0263652
GAGTTTA308800.019.01732410
Produced by FastQC (version 0.11.5)