FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005394663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005394663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12060484
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCAGA1019400.019.744432
CGCAGAG1021200.019.7085653
GCAGAGC1025800.019.6490234
TGCGCAG1043700.019.5570141
GCTCAAC1035550.019.5275129
AGCTCAA1036800.019.4923928
GCAGGAG313050.019.4815126
GAGCTCA1036650.019.414277
TTGTAGG254350.019.412661
CAGAGCT1037550.019.4072275
AGAGCTC1037450.019.3830746
AGGAGAG237600.019.3129845
CTCAACT1044450.019.31228410
TGCAGGA318400.019.198145
TCAACTA277000.019.17567611
AAGTGCA322150.019.1210232
GGAGTTT324300.019.1014679
TAGGAGA238500.019.07244
GTGCAGG320550.019.0506534
TAAGTGC337550.019.0315361
Produced by FastQC (version 0.11.5)