Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005394685 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18235287 |
Sequences flagged as poor quality | 0 |
Sequence length | 91 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 25523 | 0.1399648933411358 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTTCCG | 15330 | 0.0 | 70.2216 | 9 |
CGTTCCG | 10150 | 0.0 | 67.16083 | 9 |
TTTTCCG | 14195 | 0.0 | 66.82462 | 9 |
GGCATTA | 9725 | 0.0 | 66.25021 | 9 |
GGGTATA | 9420 | 0.0 | 65.6432 | 9 |
CATTCCG | 7325 | 0.0 | 63.472767 | 9 |
TGTTCCG | 13310 | 0.0 | 62.07202 | 9 |
TATTCCG | 11130 | 0.0 | 61.667316 | 9 |
GGACGTT | 12390 | 0.0 | 61.364433 | 9 |
GCACGTT | 10030 | 0.0 | 59.10864 | 9 |
AGTTCCG | 11095 | 0.0 | 58.22292 | 9 |
GTACGTT | 9120 | 0.0 | 57.59719 | 9 |
GATTCCG | 12125 | 0.0 | 57.23769 | 9 |
CGACGTT | 9440 | 0.0 | 56.63519 | 9 |
TCACGTT | 8000 | 0.0 | 55.56731 | 9 |
TTTCTCA | 6090 | 0.0 | 54.43209 | 9 |
TGGTATA | 8055 | 0.0 | 53.86887 | 9 |
CGCATTA | 4660 | 0.0 | 52.986828 | 9 |
TTCTGGA | 9495 | 0.0 | 52.860664 | 9 |
GGTCAAT | 5365 | 0.0 | 52.83647 | 9 |