FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005394780

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005394780
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75076377
Sequences flagged as poor quality0
Sequence length28
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGTGG2834500.021.6299531
GCGTGGT2741350.021.4686492
TCATACG2785850.021.2436128
AACGTTG1573450.021.2105641
CATCCAC2316800.021.2080381
GTGGTCA2767400.021.2047824
CATACGG2804750.021.098119
CCATGCT1554000.021.0859349
ATACGGT2805450.021.07010710
GTTGTCC1465900.021.0529984
GTGAAAG1196750.021.0504258
TCCATGC1561000.021.0040598
CGGACTG854000.021.0000081
TTGTCCA1474700.020.9284445
GTCATAC2793550.020.9240387
CGTGAAA1187700.020.7089377
GCTAAGA1151100.020.7043159
CGTGGTC2844550.020.700813
CCGGTAG657550.020.6847251
TGTCCAT1485450.020.6804736
Produced by FastQC (version 0.11.5)