EGAF00005394835 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005394835
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15030501
Sequences flagged as poor quality	0
Sequence length	91
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	1012881	6.738837248339228	No Hit
GGGAAGTTTCTGGCGGTCACGCCCTGTCCGCTTTCGCTCCAGGTCACACT	146624	0.9755097318446004	No Hit
CACGCTGCTCGTATCCGACGGGGAATTCTCACAGGAGACGAGGGGGAAAA	112193	0.7464355313239392	No Hit
TAGCTGCTGGCCGCGTACTTGTTGTTGCTTTGTTTGGAGGGTGTGGTGGT	62262	0.4142376890830186	No Hit
TAGCTGCTGGCCGCGTACTTGTTGTTGCTCTGTTTGGAGGGTTTGGTGGT	44577	0.2965769404492904	No Hit
GTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATTCA	42106	0.2801370360176284	No Hit
GGAAGTTTCTGGCGGTCACGCCCTGTCCGCTTTCGCTCCAGGTCACACTG	34901	0.23220117546314656	No Hit
CCTGAGGACTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGC	28119	0.1870795923569015	No Hit
GGGAAGTTTCTGGCGGTCACGTTCTGTCCGCTTTCGCTCCAGGTCACACT	23579	0.15687434504012873	No Hit
AGCTGCTGGCCGCGTACTTGTTGTTGCTTTGTTTGGAGGGTGTGGTGGTC	23250	0.15468546258038904	No Hit
GGTGGTACCCAGTTATCAAGCATGCCAGGACCACAGGGCTGTTATCCTTT	20559	0.13678186775011691	No Hit
CGCTGCTCGTATCCGACGGGGAATTCTCACAGGAGACGAGGGGGAAAAGG	20552	0.1367352957828884	No Hit
CTGCTGGCCGCGTACTTGTTGTTGCTTTGTTTGGAGGGTGTGGTGGTCTC	20216	0.13449984135592022	No Hit
GCTGCTGGCCGCGTACTTGTTGTTGCTTTGTTTGGAGGGTGTGGTGGTCT	19241	0.12801303163480712	No Hit
AGCTGCTGGCCGCGTACTTGTTGTTGCTCTGTTTGGAGGGTTTGGTGGTC	16543	0.11006286483730648	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTTAT	112250	83.54405	1
CGTTATC	112775	83.129616	2
TTATCCA	117540	79.71458	4
GTTATCC	121380	77.25924	3
TATCCAC	121765	77.161545	5
ATCCACC	122775	76.68255	6
CACGCTG	14680	74.927704	1
TCCACCT	132680	70.80099	7
CCACCTT	132630	70.7668	8
CACCTTC	136640	68.767746	9
GGAAGTT	27355	60.53744	2
AAGTTTC	27610	59.52257	4
CTCGTAT	19015	57.70771	8
TTCTGGC	29505	57.60096	8
TTTCTGG	29325	57.244404	7
ACGCTGC	19515	56.63001	2
GCTCGTA	19460	56.497276	7
TCGTATC	19405	56.4384	9
CTGCTCG	19695	56.0821	5
TGCTCGT	20240	54.65597	6