FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005394886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005394886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72458506
Sequences flagged as poor quality0
Sequence length28
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCCACC1702700.021.3721052
CCAAGGA1702900.021.1256647
CCACCAA1713950.021.0966534
AGGCCAC1818300.021.074091
AGACGTT1491800.021.0511151
CAAGGAC1868000.020.9584838
ACCAAGG1735550.020.9373866
GAGATGA1251800.020.8355679
CACCAAG1761650.020.7851835
AGGACAC1889700.020.77543410
AGAGATG1253250.020.7737248
AAGGACA1881700.020.5060189
GCCACCA1774550.020.4850673
CAGAGAT1251700.020.469037
CTCACAC1449900.020.3523331
TTCAAGT1262000.020.246196
AAGAAGG380800.020.2456267
GACGTTC1318550.020.1819292
GGGACCT335050.020.0342031
GTTCAAG1278900.020.0311375
Produced by FastQC (version 0.11.5)