FastQCFastQC Report
Fri 3 May 2024
EGAF00005395067

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005395067
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71690575
Total Bases6.5 Gbp
Sequences flagged as poor quality0
Sequence length91
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1064160.14843792227918384No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)