EGAF00005395171 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005395171
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	74138
Total Bases	593.1 kbp
Sequences flagged as poor quality	0
Sequence length	8
%GC	37

Per base quality graph

Per tile quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACAACCTA	29619	39.95117213844453	No Hit
ATAACATA	8404	11.335617362216407	No Hit
CGGTGAGC	5335	7.196039817637379	No Hit
TCCGAGCG	4577	6.173622164072405	No Hit
ATAACCTA	4337	5.8499015349753165	No Hit
GATCTTAT	4145	5.590925031697645	No Hit
AAAACCTA	2150	2.899997302328091	No Hit
TATCTTAT	1897	2.558741805821576	No Hit
CTAACCTA	1145	1.5444171679840297	No Hit
ATAACTTA	1136	1.532277644392889	No Hit
ATAAACTA	1118	1.5079985972106071	No Hit
ATAACCCA	811	1.0939059591572473	No Hit
ATAATCTA	735	0.9913944266098358	No Hit
GGGTGAGC	698	0.9414874962907012	No Hit
AGAACCTA	625	0.8430224716070032	No Hit
CGGTGATC	615	0.8295341120612911	No Hit
GATCTGAT	598	0.8066039008335807	Illumina PCR Primer Index 9 (100% over 8bp)
ATAACCAA	532	0.7175807278318811	No Hit
ATTACCTA	524	0.7067900401953114	No Hit
GATCTAAT	508	0.6852086649221721	No Hit
CGGTGACC	459	0.6191157031481831	No Hit
CGGTGAAC	408	0.5503250694650517	No Hit
TCCGAGAG	369	0.49772046723677466	No Hit
GTAACCTA	361	0.48692977960020506	No Hit
ATATCCTA	294	0.39655777064393427	No Hit
CGGGGAGC	222	0.2994415819148075	No Hit
GATCTCAT	208	0.28055787855081066	No Hit
CGGTGGGC	208	0.28055787855081066	No Hit
ATAACCGA	207	0.27920904259623947	No Hit
AATCTTAT	167	0.22525560441339124	No Hit
GCCGAGCG	164	0.22120909654967763	No Hit
TCCGATCG	139	0.1874881976853975	No Hit
ATAAGCTA	136	0.1834416898216839	Illumina PCR Primer Index 10 (100% over 8bp)
ATAACGTA	124	0.16725565836682943	No Hit
TTAACCTA	75	0.10116269659284037	No Hit

Can't analyse adapters as read length is too short (12 vs 0)