FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005395240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005395240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117721149
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACTGACT3149160826.751019903823735No Hit
GGTACGGG3060206325.995382528928594No Hit
TCAGTCAA2857787124.27590220003714No Hit
ATGCATTC2605380422.131795536586207No Hit
GGTACGGA2901350.24645953803933734No Hit
CACTGACA1375380.11683372203579155No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)