FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005395329

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005395329
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9241751
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCAGAA283411330.66640726416455No Hit
ATCTTACC215110923.27598958249362No Hit
TATGGTGT213801823.134338936420164No Hit
CGAACCTG201500121.80323836900605No Hit
ATCTTACA122730.13279950953017453No Hit
CGAACCTA121160.13110069725964268No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)