FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005395335

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005395335
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10716055
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGTGGT297454927.757873583142306No Hit
TCCTCCAA281245026.24519937607636No Hit
AGGAGATG259381424.204933625294007No Hit
CTACATCC211198019.708558793324595No Hit
CGGAGATG483350.4510521829161945No Hit
CTACATCA425490.39705843241752675No Hit
TCCTCAAA286860.267691795161559No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)