FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005395368

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005395368
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114039858
Sequences flagged as poor quality0
Sequence length8
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATGAGT3755394632.93054433652486No Hit
CTCAAGAC3461605130.354344180260203No Hit
AATCTTTG2860831125.08623870787352No Hit
TCGGCCCA1190579210.440027029847759No Hit
GGAGGAGT3422010.3000714013516222No Hit
AATCTTTA1791220.15706964489555925No Hit
CTCAAGAA1144850.10039033896376826No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)