FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005395480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005395480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70020753
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTCAAG1843761326.331640563762576No Hit
ACTGTGGC1741997124.87829715284553No Hit
TACCACCA1700346924.283470644767274No Hit
CTAAGTTT1583651122.61688188357529No Hit
GGGTCCAG2034930.2906181257433778No Hit
CTAAGTTA1494790.21347813840276753No Hit
TACCACAA1149050.1641013486387386No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)